Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804277.1_cds_XP_016488145.1_7848
CDS Infomation

[gene=LOC107808164] [db_xref=GeneID:107808164] [protein=protease Do-like 10, mitochondrial] [protein_id=XP_016488145.1] [location=complement(join(48235..48477,48591..48641,49114..49317,49993..50120,50641..50900,51724..51919,53610..53855,54602..55055))] [gbkey=CDS]
Sequence

ATGTTACGAATAGGTCCAAGTCTCCGTACAGCACGAAAGCTCTTAAACAGAAATCTCCAC
TTTCAATCCCCTATTATCGCCGGAGATGTAGCTCCGGTACATCACCGACGTCAAGAGCTT
CATCGATTTGTTCGGCGCTGCAATTATAGCAGCACTGTTGGTAATACTTCTGCTTCCGCC
TCATTTTTTTCCACCTTGAATAACAGCAATAGCTCAACAACTTCTACGACACCTCATGTC
GAGAGAGCTGAGGAAAATGATAGTCTTCAATCCAATGCATCGGAAGTAGAACCGGTGGCG
GCGGTGGAGCAGCGATTAAGTAGTGGAATGGTGGATGCTTATTTAGCAATAGAGCTAGCA
TTGGATTCTGTAGTTAAAATATTCACTGTTTCCAGTAGTCCTAATTACTTCCTTCCATGG
CAGAACAAGTCCCAGCGTGAAACTACGGGCTCTGGTTTTGTTATTCGGGGAAAGAGGATC
CTAACAAATGCTCATGTTGTGGCTGATCATACGTTTGTACTTGTAAGAAAGCATGGTTCT
CCTACCAAGTATAGAGCAACAGTGCAAGCTGTTGGTCATGAATGTGACTTGGCTATTCTG
GTGGTAGAAAGTGAAGAATTCTGGGAGGGCATGAACTCTTTGGAGCTTGGTGATGTTCCA
TTTCTCCAAGAAGCTGTGGCTGTTGTTGGTTATCCTCAAGGGGGAGATAATATATCCGTG
ACAAAAGGTGTTGTCTCAAGGGTAGAACCTACGCAATATGTACACGGCGCTAGTCAACTA
TTGGCAATACAAATTGATGCGGCTATAAATCCAGGGAATAGTGGAGGACCAGCAATTATG
GGTGACAAAGTTGCTGGAGTTGCTTTCCAAAACCTCTCTGGTGCAGAGAATATTGGCTAC
ATTATTCCTGTTCCTGTGATAAAGCATTTTATAGCTGGAGTAGAAGAACGGGGTGAATAC
ATTGGGTTTTGCTCTCTGGGCTTGTCATGCCAACCTACTGAAAATGCACAAATTCGAGAG
TACTTCCAAATGCAGTCCAAATTGACAGGTGTGCTTGTTAGCCGAATCAACCCACTTTCT
GATGCTTCTAGAGTATTAAAGAAAGACGACATAATCCTCTCATTTGATGGCGTACCCATA
GCAAATGATGGAACAGTTCCTTTCCGAAACAGAGAGAGGATCACATTTGACCATCTGGTA
TCTATGAAGAAACCTAATGAAACTGCTGAACTTAAAGTCTTGAGAAATGGCAAAGTGCAT
GACTTCAAAATCACGCTTCATCCTTTGCAGCCACTTGTTCCAGTTCATCAATTTGACAAG
CTTCCGAGTTATTTCATATTTGCTGGTCTCGTCTTTATTCCATTAACTCAACCATTCCTT
CACGAGTATGGAGAAGACTGGTATAATGCCTCACCCCGTCGGTTGTGTGAACGAGCCCTT
CGGGAACTACCTAAGAAACCTGGTGAACAATTCATCATCCTTTCTCAGGTGTTGATGGAT
GATATTAATGCTGGTTATGAGCGCCTTGCCGAGTTGCAGGTGAAGAAGGTTAATGGCGTA
GAAGTTCTGAATTTGAAACATTTACGTCAGCTTGTGGAAGATGGTAACCAAAAGAATGTA
AGATTTGATTTGGATGATGAGAAGGTGATTGTTTTGAACTATGAATCGGCAAGAATAGCC
ACATCGCGTATATTGAAACGCCATAGAATACCTCATGCCATGTCTAGTGACCTTACTGAT
GATGAAAATGCAGTTGAACTTCAGTCAGCTTGCTCAAGCTAA

Peptide Sequence

PEP ID

XP_016488145.1
PEP Infomation

PREDICTED: protease Do-like 10, mitochondrial [Nicotiana tabacum]
Sequence

MLRIGPSLRTARKLLNRNLHFQSPIIAGDVAPVHHRRQELHRFVRRCNYSSTVGNTSASA
SFFSTLNNSNSSTTSTTPHVERAEENDSLQSNASEVEPVAAVEQRLSSGMVDAYLAIELA
LDSVVKIFTVSSSPNYFLPWQNKSQRETTGSGFVIRGKRILTNAHVVADHTFVLVRKHGS
PTKYRATVQAVGHECDLAILVVESEEFWEGMNSLELGDVPFLQEAVAVVGYPQGGDNISV
TKGVVSRVEPTQYVHGASQLLAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAENIGY
IIPVPVIKHFIAGVEERGEYIGFCSLGLSCQPTENAQIREYFQMQSKLTGVLVSRINPLS
DASRVLKKDDIILSFDGVPIANDGTVPFRNRERITFDHLVSMKKPNETAELKVLRNGKVH
DFKITLHPLQPLVPVHQFDKLPSYFIFAGLVFIPLTQPFLHEYGEDWYNASPRRLCERAL
RELPKKPGEQFIILSQVLMDDINAGYERLAELQVKKVNGVEVLNLKHLRQLVEDGNQKNV
RFDLDDEKVIVLNYESARIATSRILKRHRIPHAMSSDLTDDENAVELQSACSS

Transcript Sequence

Gene sequence data has not been registered.